Obtains a character-state matrix from a nexml object

get_char_matrix(nex, otus_id = TRUE, states_as_labels = FALSE, verbose = FALSE)

Arguments

nex

a nexml object

otus_id

logical, default TRUE, return a column with the otus block id.

states_as_labels

logical, default FALSE, when TRUE returns states as labels instead of symbols. One can also use state_symbols2labels() to translate symbols to labels later.

verbose

logical, default FALSE, If TRUE, messages informing about steps is printed.

Value

data.frame: The character-state matrix. The first column (taxa) contains taxon ids. The second column (otu) contains otu ids. When the otus_id parameter is TRUE the third column (otus) will contain otu block ids. The remaining columns are named for each anatomical label in the dataset and contain the associated state values.

See also

get_char_matrix_meta() to retrieve metadata for a nexml object.

Examples

# applied to a (synthetic) Ontotrace matrix:
nex <- get_ontotrace_data(taxon = c("Ictalurus", "Ameiurus"), entity = "fin spine")
get_char_matrix(nex, otus_id = FALSE)
#>                      taxa         otu anterior dentation of pectoral fin spine
#> 1       Ameiurus brunneus VTO_0036273                                        1
#> 2          Ameiurus catus VTO_0036275                                        1
#> 3          Ameiurus melas VTO_0036272                                       NA
#> 4        Ameiurus natalis VTO_0036274                                       NA
#> 5      Ameiurus nebulosus VTO_0036278                                        1
#> 6  Ameiurus platycephalus VTO_0036276                                        1
#> 7   Ameiurus serracanthus VTO_0036277                                        1
#> 8     Ictalurus australis VTO_0061495                                        1
#> 9      Ictalurus balsanus VTO_0036221                                        0
#> 10      Ictalurus dugesii VTO_0061497                                       NA
#> 11     Ictalurus furcatus VTO_0036223                                        0
#> 12        Ictalurus lupus VTO_0036220                                        1
#> 13    Ictalurus mexicanus VTO_0061498                                       NA
#> 14       Ictalurus pricei VTO_0036218                                        1
#> 15    Ictalurus punctatus VTO_0036225                                        1
#>    anterior distal serration of pectoral fin spine
#> 1                                                1
#> 2                                                1
#> 3                                          0 and 1
#> 4                                                1
#> 5                                                1
#> 6                                                1
#> 7                                                1
#> 8                                                1
#> 9                                          0 and 1
#> 10                                               1
#> 11                                               1
#> 12                                               1
#> 13                                               1
#> 14                                               1
#> 15                                               1

# applied to a data matrix for a study
slist <- get_studies(taxon = "Ictalurus australis", entity = "fin spine")
nex <- get_study_data(slist$id[1])[[1]]
# for brevity show only 6 character data columns and first 5 rows
get_char_matrix(nex, otus_id = FALSE)[1:5,1:8]
#>                 taxa                                      otu
#> 1  Ameiurus brunneus otu_331eacec-f62a-489b-aa97-01f88c469d4a
#> 2     Ameiurus catus otu_f0b4abb4-c4ca-4d99-b6d3-d069176eea82
#> 3     Ameiurus melas otu_5a3062f1-9803-4120-ae34-d2aa1ce02a75
#> 4   Ameiurus natalis otu_b92dfa0d-8c16-4228-815f-c418c6e92781
#> 5 Ameiurus nebulosus otu_31f42c8a-cd70-4bf4-994d-9bc483822ba7
#>   Anal-fin rays, species mean count Anterior dentations of pectoral spine
#> 1                                 1                                     3
#> 2                                 2                                     2
#> 3                                 2                                     1
#> 4                                 3                                     1
#> 5                                 2                                     2
#>   Anterior distal serrae of pectoral spine Anterior extent of sphenotic
#> 1                                        1                            0
#> 2                                        2                            0
#> 3                                        0                            0
#> 4                                        2                            0
#> 5                                        1                            0
#>   Anterior limb of fourth transverse process Anterior process of hyomandibular
#> 1                                          2                                 2
#> 2                                          1                                 2
#> 3                                          1                                 2
#> 4                                          0                                 2
#> 5                                          0                                 2
# same, but states as labels (this can take a while)
get_char_matrix(nex, otus_id = FALSE, states_as_labels = TRUE)
#>                       taxa                                      otu
#> 1        Ameiurus brunneus otu_331eacec-f62a-489b-aa97-01f88c469d4a
#> 2           Ameiurus catus otu_f0b4abb4-c4ca-4d99-b6d3-d069176eea82
#> 3           Ameiurus melas otu_5a3062f1-9803-4120-ae34-d2aa1ce02a75
#> 4         Ameiurus natalis otu_b92dfa0d-8c16-4228-815f-c418c6e92781
#> 5       Ameiurus nebulosus otu_31f42c8a-cd70-4bf4-994d-9bc483822ba7
#> 6   Ameiurus platycephalus otu_aa535d43-f38d-435e-b7d5-3f413e7ad714
#> 7    Ameiurus serracanthus otu_6eff3beb-3ab5-4b2c-a104-4a5821fbb152
#> 8      Ictalurus australis otu_01d184a9-d779-42dd-b6bc-1764b04d4cb1
#> 9       Ictalurus balsanus otu_2b0b6c19-e51c-400f-b738-000d9d82a36f
#> 10       Ictalurus dugesii otu_0b52014d-f9df-4cc3-9694-48c0234c195b
#> 11      Ictalurus furcatus otu_8257dd55-8ed2-409f-b92a-cb9e609da7cb
#> 12         Ictalurus lupus otu_7359fcc3-edb3-4ed9-a236-c1e846b8a5f6
#> 13     Ictalurus mexicanus otu_3dde3e49-d73d-48bb-945b-fc97f2040cc0
#> 14        Ictalurus pricei otu_da138745-cedf-4cbc-8305-0e602518548c
#> 15     Ictalurus punctatus otu_0ac943f8-08df-4b21-ba82-cea20cff25cd
#> 16          Noturus flavus otu_3d644586-19a2-49d5-ab3c-673f483c362f
#> 17        Noturus insignis otu_dddcc44c-8c9a-40a7-a7b3-277ce9871593
#> 18       Noturus stigmosus otu_b2b0135f-ded2-4f4b-8e4e-1d015ad342e2
#> 19  Prietella phreatophila otu_40ea9c47-775f-4be1-80da-c4b7535ad5ce
#> 20     Pylodictis olivaris otu_f2bb7423-f928-4655-a602-5c2143f1c877
#> 21        Satan eurystomus otu_eeefeec8-36f7-4b66-9002-ca445fce493c
#> 22 Trogloglanis pattersoni otu_b42e7ffd-330e-4ea2-a099-fb59a0058857
#>    Anal-fin rays, species mean count Anterior dentations of pectoral spine
#> 1                            16.1-20                                 large
#> 2                          20.1-25.5                              moderate
#> 3                          20.1-25.5                                 small
#> 4                            25.6-28                                 small
#> 5                          20.1-25.5                              moderate
#> 6                          20.1-25.5                                 large
#> 7                          20.1-25.5                              moderate
#> 8                            28.1-30                              moderate
#> 9                            25.6-28                                absent
#> 10                         20.1-25.5                                 small
#> 11                               >30                                absent
#> 12                         20.1-25.5                              moderate
#> 13                         20.1-25.5                                 small
#> 14                         20.1-25.5                              moderate
#> 15                           28.1-30                              moderate
#> 16                           16.1-20                                  <NA>
#> 17                           16.1-20                                  <NA>
#> 18                               <16                            very large
#> 19                               <16                                absent
#> 20                           16.1-20                                  <NA>
#> 21                           16.1-20                                absent
#> 22                               <16                                absent
#>       Anterior distal serrae of pectoral spine
#> 1                   <3 moderately sharp serrae
#> 2                  3-6 moderately sharp serrae
#> 3                 absent or scarcely developed
#> 4                  3-6 moderately sharp serrae
#> 5                   <3 moderately sharp serrae
#> 6                   <3 moderately sharp serrae
#> 7                   <3 moderately sharp serrae
#> 8                   <3 moderately sharp serrae
#> 9                 absent or scarcely developed
#> 10                  <3 moderately sharp serrae
#> 11                  <3 moderately sharp serrae
#> 12                  <3 moderately sharp serrae
#> 13                  <3 moderately sharp serrae
#> 14                  <3 moderately sharp serrae
#> 15                  <3 moderately sharp serrae
#> 16   >6 sharp serrae over distal half of spine
#> 17   >6 sharp serrae over distal half of spine
#> 18                  <3 moderately sharp serrae
#> 19                absent or scarcely developed
#> 20 very large, sharp serrae over most of spine
#> 21                absent or scarcely developed
#> 22                absent or scarcely developed
#>                                                     Anterior extent of sphenotic
#> 1  reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 2  reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 3  reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 4  reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 5  reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 6  reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 7  reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 8  reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 9  reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 10 reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 11 reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 12 reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 13 reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 14 reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 15 reaches or extends anterior to the level of anterior margin of epiphyseal bar
#> 16    does not reach anterior to the level of posterior margin of epiphyseal bar
#> 17    does not reach anterior to the level of posterior margin of epiphyseal bar
#> 18    does not reach anterior to the level of posterior margin of epiphyseal bar
#> 19    does not reach anterior to the level of posterior margin of epiphyseal bar
#> 20    does not reach anterior to the level of posterior margin of epiphyseal bar
#> 21                                                                          <NA>
#> 22    does not reach anterior to the level of posterior margin of epiphyseal bar
#>                      Anterior limb of fourth transverse process
#> 1  supracleithral facet shallow, basal recess shallow and broad
#> 2        supracleithral facet deep, basal recess deep and broad
#> 3        supracleithral facet deep, basal recess deep and broad
#> 4       supracleithral facet deep, basal recess deep and narrow
#> 5       supracleithral facet deep, basal recess deep and narrow
#> 6  supracleithral facet shallow, basal recess shallow and broad
#> 7        supracleithral facet deep, basal recess deep and broad
#> 8       supracleithral facet deep, basal recess deep and narrow
#> 9       supracleithral facet deep, basal recess deep and narrow
#> 10      supracleithral facet deep, basal recess deep and narrow
#> 11      supracleithral facet deep, basal recess deep and narrow
#> 12      supracleithral facet deep, basal recess deep and narrow
#> 13      supracleithral facet deep, basal recess deep and narrow
#> 14      supracleithral facet deep, basal recess deep and narrow
#> 15      supracleithral facet deep, basal recess deep and narrow
#> 16 supracleithral facet shallow, basal recess shallow and broad
#> 17 supracleithral facet shallow, basal recess shallow and broad
#> 18 supracleithral facet shallow, basal recess shallow and broad
#> 19       supracleithral facet deep, basal recess deep and broad
#> 20 supracleithral facet shallow, basal recess shallow and broad
#> 21                                                         <NA>
#> 22                                                         <NA>
#>        Anterior process of hyomandibular Anterior ridge of pectoral spine
#> 1      flattened and anteriorly directed                             <NA>
#> 2      flattened and anteriorly directed                          present
#> 3      flattened and anteriorly directed                             <NA>
#> 4      flattened and anteriorly directed                          present
#> 5      flattened and anteriorly directed                          present
#> 6      flattened and anteriorly directed                             <NA>
#> 7      flattened and anteriorly directed                           absent
#> 8      flattened and anteriorly directed                           absent
#> 9      flattened and anteriorly directed                          present
#> 10     flattened and anteriorly directed                          present
#> 11     flattened and anteriorly directed                           absent
#> 12     flattened and anteriorly directed                           absent
#> 13     flattened and anteriorly directed                           absent
#> 14     flattened and anteriorly directed                           absent
#> 15     flattened and anteriorly directed                           absent
#> 16   slender and anterodorsally directed                          present
#> 17   slender and anterodorsally directed                             <NA>
#> 18 flattened and anterodorsally directed                           absent
#> 19 flattened and anterodorsally directed                             <NA>
#> 20 flattened and anterodorsally directed                             <NA>
#> 21                                  <NA>                           absent
#> 22   slender and anterodorsally directed                           absent
#>                  Anteroventral crest of dentary
#> 1                        developed to symphysis
#> 2                        developed to symphysis
#> 3                        developed to symphysis
#> 4                                          <NA>
#> 5                        developed to symphysis
#> 6                        developed to symphysis
#> 7                        developed to symphysis
#> 8                                        absent
#> 9  present below second and third sensory pores
#> 10 present below second and third sensory pores
#> 11 present below second and third sensory pores
#> 12                                       absent
#> 13                                       absent
#> 14                                       absent
#> 15                                       absent
#> 16 present below second and third sensory pores
#> 17                                       absent
#> 18                                       absent
#> 19                                       absent
#> 20                                       absent
#> 21                                       absent
#> 22                                       absent
#>                                                             Ascending wings of parasphenoid
#> 1  nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 2  nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 3  nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 4  nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 5  nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 6  nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 7  nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 8  nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 9  nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 10 nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 11 nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 12 nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 13 nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 14 nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 15 nearly horizontal below the trigeminofacialis foramen and along the pterosphenoid suture
#> 16                          twisted vertically and medially along the pterosphenoid suturea
#> 17                          twisted vertically and medially along the pterosphenoid suturea
#> 18                          twisted vertically and medially along the pterosphenoid suturea
#> 19                          twisted vertically and medially along the pterosphenoid suturea
#> 20                          twisted vertically and medially along the pterosphenoid suturea
#> 21                                                                                     <NA>
#> 22                                                                                     <NA>
#>                        Caudal fin Caudal vertebrae, species mean number
#> 1  scarcely emarginate to rounded                             25.6-28.5
#> 2       forked with rounded lobes                             25.6-28.5
#> 3  scarcely emarginate to rounded                             24.0-25.5
#> 4  scarcely emarginate to rounded                             25.6-28.5
#> 5  scarcely emarginate to rounded                             25.6-28.5
#> 6  scarcely emarginate to rounded                             25.6-28.5
#> 7  scarcely emarginate to rounded                             25.6-28.5
#> 8       forked with pointed lobes                             25.6-28.5
#> 9       forked with pointed lobes                             25.6-28.5
#> 10      forked with pointed lobes                             25.6-28.5
#> 11      forked with pointed lobes                                 >30.0
#> 12      forked with pointed lobes                             25.6-28.5
#> 13      forked with pointed lobes                             25.6-28.5
#> 14      forked with pointed lobes                             25.6-28.5
#> 15      forked with pointed lobes                           28 .6- 30.0
#> 16 scarcely emarginate to rounded                             25.6-28.5
#> 17 scarcely emarginate to rounded                             25.6-28.5
#> 18 scarcely emarginate to rounded                                 <23.9
#> 19 scarcely emarginate to rounded                                 <23.9
#> 20 scarcely emarginate to rounded                             25.6-28.5
#> 21 scarcely emarginate to rounded                             24.0-25.5
#> 22 scarcely emarginate to rounded                                 <23.9
#>                     Caudal-fin branched ray numbers
#> 1                  15 branched rays, total rays <55
#> 2                  15 branched rays, total rays <55
#> 3                  15 branched rays, total rays <55
#> 4                  15 branched rays, total rays <55
#> 5                  15 branched rays, total rays <55
#> 6                  15 branched rays, total rays <55
#> 7                  15 branched rays, total rays <55
#> 8                  15 branched rays, total rays <55
#> 9                  15 branched rays, total rays <55
#> 10                 15 branched rays, total rays <55
#> 11                 15 branched rays, total rays <55
#> 12                 15 branched rays, total rays <55
#> 13                 15 branched rays, total rays <55
#> 14                 15 branched rays, total rays <55
#> 15                 15 branched rays, total rays <55
#> 16        variable of branched rays, total rays >55
#> 17        variable of branched rays, total rays >55
#> 18 variable number of branched rays, total rays <55
#> 19                 13 branched rays, total rays <55
#> 20                 15 branched rays, total rays <55
#> 21                 15 branched rays, total rays <55
#> 22                 15 branched rays, total rays <55
#>    Ceratohyal-ventral hypohyal joint
#> 1                        synchondral
#> 2                        synchondral
#> 3                        synchondral
#> 4                        synchondral
#> 5                        synchondral
#> 6                        synchondral
#> 7                        synchondral
#> 8                        synchondral
#> 9                        synchondral
#> 10                       synchondral
#> 11                       synchondral
#> 12                       synchondral
#> 13                       synchondral
#> 14                       synchondral
#> 15                       synchondral
#> 16                       synchondral
#> 17                       synchondral
#> 18                       synchondral
#> 19                       synchondral
#> 20                    mostly sutural
#> 21                              <NA>
#> 22                       synchondral
#>    Coracoid midline sutures, species mean count
#> 1                                            >7
#> 2                                            >7
#> 3                                         5.1-7
#> 4                                         5.1-7
#> 5                                            >7
#> 6                                            >7
#> 7                                            >7
#> 8                                         5.1-7
#> 9                                         5.1-7
#> 10                                           >7
#> 11                                        5.1-7
#> 12                                        5.1-7
#> 13                                        5.1-7
#> 14                                        5.1-7
#> 15                                        5.1-7
#> 16                                        5.1-7
#> 17                                        5.1-7
#> 18                                           >7
#> 19                                        5.1-7
#> 20                                           <5
#> 21                                           <5
#> 22                                           >7
#>                                           Coronoid process
#> 1            high, posterior side abruptly inclined dorsad
#> 2            high, posterior side abruptly inclined dorsad
#> 3            high, posterior side abruptly inclined dorsad
#> 4            high, posterior side abruptly inclined dorsad
#> 5            high, posterior side abruptly inclined dorsad
#> 6            high, posterior side abruptly inclined dorsad
#> 7            high, posterior side abruptly inclined dorsad
#> 8  high, posterior side moderately steeply inclined dorsad
#> 9  high, posterior side moderately steeply inclined dorsad
#> 10 high, posterior side moderately steeply inclined dorsad
#> 11 high, posterior side moderately steeply inclined dorsad
#> 12 high, posterior side moderately steeply inclined dorsad
#> 13 high, posterior side moderately steeply inclined dorsad
#> 14 high, posterior side moderately steeply inclined dorsad
#> 15 high, posterior side moderately steeply inclined dorsad
#> 16 high, posterior side moderately steeply inclined dorsad
#> 17 high, posterior side moderately steeply inclined dorsad
#> 18 high, posterior side moderately steeply inclined dorsad
#> 19              low, posterior side gently inclined dorsad
#> 20              low, posterior side gently inclined dorsad
#> 21              low, posterior side gently inclined dorsad
#> 22                                                    <NA>
#>    Crest on hyomandibular for A2 bundle of jaw adductor muscle
#> 1                         at or above level of opercular facet
#> 2                         at or above level of opercular facet
#> 3                         at or above level of opercular facet
#> 4                         at or above level of opercular facet
#> 5                         at or above level of opercular facet
#> 6                         at or above level of opercular facet
#> 7                         at or above level of opercular facet
#> 8                         at or above level of opercular facet
#> 9                         at or above level of opercular facet
#> 10                        at or above level of opercular facet
#> 11                        at or above level of opercular facet
#> 12                        at or above level of opercular facet
#> 13                        at or above level of opercular facet
#> 14                        at or above level of opercular facet
#> 15                        at or above level of opercular facet
#> 16                              below level of opercular facet
#> 17                              below level of opercular facet
#> 18                              below level of opercular facet
#> 19                              below level of opercular facet
#> 20                              below level of opercular facet
#> 21                                                        <NA>
#> 22                        at or above level of opercular facet
#>    Crest on hyomandibular for levator arcus palatini muscle
#> 1                                        long , sharp crest
#> 2                                        long , sharp crest
#> 3                                        long , sharp crest
#> 4                                         long, blunt crest
#> 5                                        long , sharp crest
#> 6                                        long , sharp crest
#> 7                                        long , sharp crest
#> 8                                        long , sharp crest
#> 9                                      short, rounded ridge
#> 10                                       long , sharp crest
#> 11                                     short, rounded ridge
#> 12                                       long , sharp crest
#> 13                                       long , sharp crest
#> 14                                       long , sharp crest
#> 15                                        long, blunt crest
#> 16                                       long , sharp crest
#> 17                                       long , sharp crest
#> 18                                       long , sharp crest
#> 19                                     short, rounded ridge
#> 20           long, sharp crest extending onto metapterygoid
#> 21                                                     <NA>
#> 22                                        long, blunt crest
#>    Crest on hyomandibular for levator operculi muscle
#> 1                                               small
#> 2                                               small
#> 3                                               small
#> 4                                               small
#> 5                                               small
#> 6                                               small
#> 7                                               small
#> 8                                               large
#> 9                                               large
#> 10                                              large
#> 11                                              large
#> 12                                              large
#> 13                                              large
#> 14                                              large
#> 15                                              large
#> 16                                              small
#> 17                                              small
#> 18                                              small
#> 19                                             absent
#> 20                                             absent
#> 21                                               <NA>
#> 22                                             absent
#>    Cross-sectional form of skull (juveniles and young adults)
#> 1                                                   flattened
#> 2                                           moderately arched
#> 3                                           moderately arched
#> 4                                           moderately arched
#> 5                                           moderately arched
#> 6                                                   flattened
#> 7                                           moderately arched
#> 8                                                      arched
#> 9                                                      arched
#> 10                                                     arched
#> 11                                                     arched
#> 12                                                     arched
#> 13                                                     arched
#> 14                                                     arched
#> 15                                                     arched
#> 16                                                  flattened
#> 17                                                  flattened
#> 18                                          moderately arched
#> 19                                          moderately arched
#> 20                                                  flattened
#> 21                                                  flattened
#> 22                                                     arched
#>    Depth of Weberian complex
#> 1                    shallow
#> 2               intermediate
#> 3               intermediate
#> 4               intermediate
#> 5               intermediate
#> 6                    shallow
#> 7               intermediate
#> 8               intermediate
#> 9               intermediate
#> 10              intermediate
#> 11                      deep
#> 12              intermediate
#> 13              intermediate
#> 14              intermediate
#> 15              intermediate
#> 16                   shallow
#> 17                   shallow
#> 18                   shallow
#> 19                   shallow
#> 20                   shallow
#> 21                      <NA>
#> 22              intermediate
#>                                                    Development of superficial ossification
#> 1                                well developed, fifth and complex centra strongly sutured
#> 2                                well developed, fifth and complex centra strongly sutured
#> 3                                well developed, fifth and complex centra strongly sutured
#> 4                                well developed, fifth and complex centra strongly sutured
#> 5                                well developed, fifth and complex centra strongly sutured
#> 6                                well developed, fifth and complex centra strongly sutured
#> 7                                well developed, fifth and complex centra strongly sutured
#> 8  well developed, extending onto sixth centrum, fifth and complex centra strongly sutured
#> 9  well developed, extending onto sixth centrum, fifth and complex centra strongly sutured
#> 10 well developed, extending onto sixth centrum, fifth and complex centra strongly sutured
#> 11 well developed, extending onto sixth centrum, fifth and complex centra strongly sutured
#> 12 well developed, extending onto sixth centrum, fifth and complex centra strongly sutured
#> 13 well developed, extending onto sixth centrum, fifth and complex centra strongly sutured
#> 14 well developed, extending onto sixth centrum, fifth and complex centra strongly sutured
#> 15 well developed, extending onto sixth centrum, fifth and complex centra strongly sutured
#> 16                               well developed, fifth and complex centra strongly sutured
#> 17                               well developed, fifth and complex centra strongly sutured
#> 18                               well developed, fifth and complex centra strongly sutured
#> 19                             scarcely developed, fifth and complex centra weakly sutured
#> 20                               well developed, fifth and complex centra strongly sutured
#> 21                             scarcely developed, fifth and complex centra weakly sutured
#> 22                             scarcely developed, fifth and complex centra weakly sutured
#>    Dorsal edge of ceratohyal Dorsal hypohyal Dorsal pits on first centrum
#> 1                  high keel  well developed                      present
#> 2                  high keel  well developed                      present
#> 3                  high keel  well developed                      present
#> 4                  high keel  well developed                      present
#> 5                  high keel  well developed                      present
#> 6                  high keel  well developed                      present
#> 7                  high keel  well developed                      present
#> 8                sharp crest  well developed                      present
#> 9                sharp crest  well developed                      present
#> 10               sharp crest  well developed                      present
#> 11               sharp crest  well developed                      present
#> 12               sharp crest  well developed                      present
#> 13               sharp crest  well developed                      present
#> 14               sharp crest  well developed                      present
#> 15               sharp crest  well developed                      present
#> 16               sharp crest  well developed                      present
#> 17               sharp crest  well developed                      present
#> 18               sharp crest small to absent                      present
#> 19               sharp crest  well developed                      present
#> 20                   rounded  well developed                       absent
#> 21                      <NA>            <NA>                         <NA>
#> 22               sharp crest  well developed                         <NA>
#>                                                                                                                           Dorsal-fin spine development
#> 1  heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 2  heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 3  heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 4  heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 5  heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 6  heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 7  heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 8  heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 9                                                                                              weakly ossified, sharp, longer than pectoral spine 0110
#> 10 heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 11           heavily ossified, sharp, longer than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,1,0,0
#> 12 heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 13 heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 14 heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 15 heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 16     heavily ossified, sharp, much shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 17     heavily ossified, sharp, much shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 18 heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 19                           weakly ossified, segmented distally.  In the original matrix this character was coded in additive binary format:  0,0,0,1
#> 20 heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 21 heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 22 heavily ossified, sharp, a little shorter than pectoral spine.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#>    Endopterygoid size                 Epihyal shape Epihyal-ceratohyal joint
#> 1               large                    triangular       mostly synchondral
#> 2               large                    triangular       mostly synchondral
#> 3            moderate                    triangular       mostly synchondral
#> 4               large                    triangular       mostly synchondral
#> 5            moderate                    triangular       mostly synchondral
#> 6               large                    triangular       mostly synchondral
#> 7               large                    triangular       mostly synchondral
#> 8               small                    triangular       mostly synchondral
#> 9               small                    triangular       mostly synchondral
#> 10              small                    triangular       mostly synchondral
#> 11              small                    triangular       mostly synchondral
#> 12              small                    triangular       mostly synchondral
#> 13              small                    triangular       mostly synchondral
#> 14              small                    triangular       mostly synchondral
#> 15              small                    triangular       mostly synchondral
#> 16              small                    triangular           mostly sutural
#> 17              small                    triangular           mostly sutural
#> 18              small                    triangular       mostly synchondral
#> 19             absent                    triangular       mostly synchondral
#> 20              large ventral edge expanded, convex           mostly sutural
#> 21               <NA>                          <NA>                     <NA>
#> 22             absent                    triangular       mostly synchondral
#>                   Extensor muscle fossa on coracoid
#> 1    broad and shallow, posterior edge not upturned
#> 2    broad and shallow, posterior edge not upturned
#> 3        narrow and shallow, posterior not upturned
#> 4    broad and shallow, posterior edge not upturned
#> 5        narrow and shallow, posterior not upturned
#> 6    broad and shallow, posterior edge not upturned
#> 7    broad and shallow, posterior edge not upturned
#> 8  narrow and deep, posterior edge sharply upturned
#> 9  narrow and deep, posterior edge sharply upturned
#> 10 narrow and deep, posterior edge sharply upturned
#> 11 narrow and deep, posterior edge sharply upturned
#> 12 narrow and deep, posterior edge sharply upturned
#> 13 narrow and deep, posterior edge sharply upturned
#> 14 narrow and deep, posterior edge sharply upturned
#> 15 narrow and deep, posterior edge sharply upturned
#> 16   broad and shallow, posterior edge not upturned
#> 17   broad and shallow, posterior edge not upturned
#> 18 narrow and deep, posterior edge sharply upturned
#> 19   broad and shallow, posterior edge not upturned
#> 20   broad and shallow, posterior edge not upturned
#> 21                                             <NA>
#> 22   broad and shallow, posterior edge not upturned
#>                                                                                                                                     External foramen of facial nerve canal through hyomandibular
#> 1                                      partly superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0
#> 2  completely superimposed on mandibular nerve foramen and opening ususally bridged by broad bony lamina.  In the original matrix this character was coded in additive binary format:  1,1,0,0,0
#> 3                                      partly superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0
#> 4                                               separate from mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0
#> 5                                      partly superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0
#> 6                                      partly superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0
#> 7                                      partly superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0
#> 8                                  completely superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0
#> 9                                  completely superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0
#> 10                                 completely superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0
#> 11                                 completely superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0
#> 12                                 completely superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0
#> 13                                 completely superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0
#> 14                                 completely superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0
#> 15                                   completely superimposed on mandibular nerve foramen and constricted.  In the original matrix this character was coded in additive binary format:  1,0,0,1,1
#> 16                                     partly superimposed on mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0
#> 17                                              separate from mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0
#> 18                                              separate from mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0
#> 19                                              separate from mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0
#> 20          completely superimposed on mandibular nerve foramen and opening bridged by broad bony lamina.  In the original matrix this character was coded in additive binary format:  1,1,1,0,0
#> 21                                                                                                                                                                                          <NA>
#> 22                                              separate from mandibular nerve foramen and unconstricted.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0
#>                                                                                                 Extrascapular bone composition
#> 1  laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 2  laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 3  laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 4  laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 5  laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 6  laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 7  laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 8  laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 9  laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 10 laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 11 laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 12 laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 13 laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 14 laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 15 laterosensory and laminar parts separated.  In the original matrix this character was coded in additive binary format:  1,1
#> 16                       laminar part absent:  In the original matrix this character was coded in additive binary format:  1,0
#> 17                       laminar part absent:  In the original matrix this character was coded in additive binary format:  1,0
#> 18                       laminar part absent:  In the original matrix this character was coded in additive binary format:  1,0
#> 19                       laminar part absent:  In the original matrix this character was coded in additive binary format:  1,0
#> 20                                   complete.  In the original matrix this character was coded in additive binary format: 0,0
#> 21                                                                                                                        <NA>
#> 22                 laterosensory part absent.  In the original matrix this character was coded in additive binary format:  0,1
#>                          First mandibular sensory pore and tube
#> 1                                         remote from symphysis
#> 2                                         remote from symphysis
#> 3                                         remote from symphysis
#> 4                                            close to symphysis
#> 5                                         remote from symphysis
#> 6                                         remote from symphysis
#> 7                                         remote from symphysis
#> 8                                         remote from symphysis
#> 9                                         remote from symphysis
#> 10                                        remote from symphysis
#> 11                                        remote from symphysis
#> 12                                        remote from symphysis
#> 13                                        remote from symphysis
#> 14                                        remote from symphysis
#> 15                                        remote from symphysis
#> 16                                           close to symphysis
#> 17                                           close to symphysis
#> 18                                           close to symphysis
#> 19                                           close to symphysis
#> 20 close to symphysis and tubes opening into single common pore
#> 21 close to symphysis and tubes opening into single common pore
#> 22                                        remote from symphysis
#>                       Gas bladder Gill membranes
#> 1           anterior chamber only      divergent
#> 2           anterior chamber only      divergent
#> 3           anterior chamber only      divergent
#> 4           anterior chamber only      divergent
#> 5           anterior chamber only      divergent
#> 6           anterior chamber only      divergent
#> 7           anterior chamber only      divergent
#> 8           anterior chamber only      divergent
#> 9  anterior and posterior chamber      divergent
#> 10          anterior chamber only      divergent
#> 11 anterior and posterior chamber      divergent
#> 12          anterior chamber only      divergent
#> 13          anterior chamber only      divergent
#> 14          anterior chamber only      divergent
#> 15          anterior chamber only      divergent
#> 16          anterior chamber only      divergent
#> 17          anterior chamber only      divergent
#> 18          anterior chamber only      divergent
#> 19          anterior chamber only      divergent
#> 20          anterior chamber only    overlapping
#> 21                         absent    overlapping
#> 22                         absent      divergent
#>       Hyomandibular (otic region joint) shape Hyomandibular-metapterygoid joint
#> 1  short, cranial facet less than twice depth                              long
#> 2  short, cranial facet less than twice depth                              long
#> 3  short, cranial facet less than twice depth                              long
#> 4  short, cranial facet less than twice depth                              long
#> 5  short, cranial facet less than twice depth                              long
#> 6  short, cranial facet less than twice depth                              long
#> 7  short, cranial facet less than twice depth                              long
#> 8  short, cranial facet less than twice depth                             short
#> 9  short, cranial facet less than twice depth                             short
#> 10 short, cranial facet less than twice depth                             short
#> 11 short, cranial facet less than twice depth                             short
#> 12 short, cranial facet less than twice depth                             short
#> 13 short, cranial facet less than twice depth                             short
#> 14 short, cranial facet less than twice depth                             short
#> 15 short, cranial facet less than twice depth                             short
#> 16 short, cranial facet less than twice depth                              long
#> 17 short, cranial facet less than twice depth                              long
#> 18 short, cranial facet less than twice depth                              long
#> 19 short, cranial facet less than twice depth                              long
#> 20        elongate, cranial facet twice depth                              long
#> 21                                       <NA>                              <NA>
#> 22 short, cranial facet less than twice depth                              long
#>    Hyomandibular-quadrate joint
#> 1                       sutural
#> 2                       sutural
#> 3                       sutural
#> 4                       sutural
#> 5                       sutural
#> 6                       sutural
#> 7                       sutural
#> 8                   synchondral
#> 9                   synchondral
#> 10                  synchondral
#> 11                  synchondral
#> 12                  synchondral
#> 13                  synchondral
#> 14                  synchondral
#> 15                  synchondral
#> 16                      sutural
#> 17                      sutural
#> 18                      sutural
#> 19                      sutural
#> 20                      sutural
#> 21                         <NA>
#> 22                  synchondral
#>                                                 Hypurals
#> 1                                  six separate elements
#> 2                                  six separate elements
#> 3                                  six separate elements
#> 4                                  six separate elements
#> 5                                  six separate elements
#> 6                                  six separate elements
#> 7                                  six separate elements
#> 8                                  six separate elements
#> 9                                  six separate elements
#> 10                                 six separate elements
#> 11                                 six separate elements
#> 12                                 six separate elements
#> 13                                 six separate elements
#> 14                                 six separate elements
#> 15                                 six separate elements
#> 16                        five elements, fusion variable
#> 17                                 six separate elements
#> 18                        five elements, fusion variable
#> 19 parhypural, first and second fused, third-fifth fused
#> 20                                 six separate elements
#> 21 parhypural, first and second fused, third-fifth fused
#> 22           first and second fused , third -fifth fused
#>                Hypurapophysis    Infraorbital bones        Interopercle shape
#> 1              well developed                 seven                triangular
#> 2              well developed                 seven                triangular
#> 3              well developed                 seven                triangular
#> 4              well developed                 seven                triangular
#> 5              well developed                 seven                triangular
#> 6              well developed                 seven                triangular
#> 7              well developed                 seven                triangular
#> 8              well developed variably six or seven expanded posteroventrally
#> 9              well developed variably six or seven expanded posteroventrally
#> 10             well developed variably six or seven expanded posteroventrally
#> 11             well developed variably six or seven expanded posteroventrally
#> 12             well developed variably six or seven expanded posteroventrally
#> 13             well developed variably six or seven expanded posteroventrally
#> 14             well developed variably six or seven expanded posteroventrally
#> 15             well developed variably six or seven expanded posteroventrally
#> 16 weakly developed to absent                 seven                triangular
#> 17 weakly developed to absent                 seven                triangular
#> 18 weakly developed to absent                 seven                triangular
#> 19             well developed                   six                triangular
#> 20             well developed                 seven                 elongated
#> 21                       <NA>                  <NA>                      <NA>
#> 22 weakly developed to absent                   six expanded posteroventrally
#>    Jaw adductor muscle attachment surface on preopercle
#> 1                concave, expanded behind sensory canal
#> 2                concave, expanded behind sensory canal
#> 3                concave, expanded behind sensory canal
#> 4                concave, expanded behind sensory canal
#> 5                concave, expanded behind sensory canal
#> 6                concave, expanded behind sensory canal
#> 7                concave, expanded behind sensory canal
#> 8              flattened, expanded behind sensory canal
#> 9              flattened, expanded behind sensory canal
#> 10             flattened, expanded behind sensory canal
#> 11             flattened, expanded behind sensory canal
#> 12             flattened, expanded behind sensory canal
#> 13             flattened, expanded behind sensory canal
#> 14             flattened, expanded behind sensory canal
#> 15             flattened, expanded behind sensory canal
#> 16               concave, expanded behind sensory canal
#> 17               concave, expanded behind sensory canal
#> 18               concave, expanded behind sensory canal
#> 19         flattened, not expanded behind sensory canal
#> 20         flattened, not expanded behind sensory canal
#> 21                                                 <NA>
#> 22         flattened, not expanded behind sensory canal
#>                                                                   Jaw adductor musculature-A3 layer
#> 1              completely subdivided twice to form two jaw adductor bundles plus adductor tentaculi
#> 2              completely subdivided twice to form two jaw adductor bundles plus adductor tentaculi
#> 3              completely subdivided twice to form two jaw adductor bundles plus adductor tentaculi
#> 4              completely subdivided twice to form two jaw adductor bundles plus adductor tentaculi
#> 5              completely subdivided twice to form two jaw adductor bundles plus adductor tentaculi
#> 6              completely subdivided twice to form two jaw adductor bundles plus adductor tentaculi
#> 7              completely subdivided twice to form two jaw adductor bundles plus adductor tentaculi
#> 8  incompletely subdivided twice to form two jaw adductor bundles plus incipient adductor tentaculi
#> 9  incompletely subdivided twice to form two jaw adductor bundles plus incipient adductor tentaculi
#> 10             completely subdivided twice to form two jaw adductor bundles plus adductor tentaculi
#> 11 incompletely subdivided twice to form two jaw adductor bundles plus incipient adductor tentaculi
#> 12             completely subdivided twice to form two jaw adductor bundles plus adductor tentaculi
#> 13 incompletely subdivided twice to form two jaw adductor bundles plus incipient adductor tentaculi
#> 14 incompletely subdivided twice to form two jaw adductor bundles plus incipient adductor tentaculi
#> 15 incompletely subdivided twice to form two jaw adductor bundles plus incipient adductor tentaculi
#> 16                                             subdivided once to form two dentary adductor bundles
#> 17                                             subdivided once to form two dentary adductor bundles
#> 18                                             subdivided once to form two dentary adductor bundles
#> 19                                                                                             <NA>
#> 20                                                                                   not subdivided
#> 21                                                                                             <NA>
#> 22                                                                                             <NA>
#>                             Jaw teeth-shape and size gradation
#> 1    scarcely curved, strong anteroposterior gradation in size
#> 2    scarcely curved, slight anteroposterior gradation in size
#> 3    scarcely curved, slight anteroposterior gradation in size
#> 4    scarcely curved, slight anteroposterior gradation in size
#> 5    scarcely curved, slight anteroposterior gradation in size
#> 6    scarcely curved, slight anteroposterior gradation in size
#> 7    scarcely curved, slight anteroposterior gradation in size
#> 8  scarcely curved, moderate anteroposterior gradation in size
#> 9  scarcely curved, moderate anteroposterior gradation in size
#> 10 scarcely curved, moderate anteroposterior gradation in size
#> 11 scarcely curved, moderate anteroposterior gradation in size
#> 12 scarcely curved, moderate anteroposterior gradation in size
#> 13 scarcely curved, moderate anteroposterior gradation in size
#> 14 scarcely curved, moderate anteroposterior gradation in size
#> 15 scarcely curved, moderate anteroposterior gradation in size
#> 16   scarcely curved, slight anteroposterior gradation in size
#> 17   scarcely curved, slight anteroposterior gradation in size
#> 18   scarcely curved, slight anteroposterior gradation in size
#> 19   scarcely curved, slight anteroposterior gradation in size
#> 20 strongly curved, moderate anteroposterior gradation in size
#> 21   scarcely curved, slight anteroposterior gradation in size
#> 22                                                        <NA>
#>                                                   Lateral ethmoid wing
#> 1                          long, nearly horizontal, no anterior flange
#> 2                          long, nearly horizontal, no anterior flange
#> 3                         short, nearly horizontal, no anterior flange
#> 4                         short, nearly horizontal, no anterior flange
#> 5                         short, nearly horizontal, no anterior flange
#> 6                          long, nearly horizontal, no anterior flange
#> 7                          long, nearly horizontal, no anterior flange
#> 8                           long, ventrally curved, no anterior flange
#> 9                           long, ventrally curved, no anterior flange
#> 10                          long, ventrally curved, no anterior flange
#> 11                          long, ventrally curved, no anterior flange
#> 12                          long, ventrally curved, no anterior flange
#> 13                          long, ventrally curved, no anterior flange
#> 14                          long, ventrally curved, no anterior flange
#> 15                          long, ventrally curved, no anterior flange
#> 16                        short, nearly horizontal, no anterior flange
#> 17                        short, nearly horizontal, no anterior flange
#> 18                        short, nearly horizontal, no anterior flange
#> 19                        short, nearly horizontal, no anterior flange
#> 20 short, nearly horizontal, an anterior flange above palatine condyle
#> 21                                                                <NA>
#> 22                        short, nearly horizontal, no anterior flange
#>             Lateral line extent
#> 1                   to hypurals
#> 2                   to hypurals
#> 3  not reaching caudal skeleton
#> 4  not reaching caudal skeleton
#> 5  not reaching caudal skeleton
#> 6                   to hypurals
#> 7                   to hypurals
#> 8    to base of caudal-fin rays
#> 9    to base of caudal-fin rays
#> 10   to base of caudal-fin rays
#> 11   to base of caudal-fin rays
#> 12   to base of caudal-fin rays
#> 13   to base of caudal-fin rays
#> 14   to base of caudal-fin rays
#> 15   to base of caudal-fin rays
#> 16                  to hypurals
#> 17 not reaching caudal skeleton
#> 18 not reaching caudal skeleton
#> 19                         <NA>
#> 20   to base of caudal-fin rays
#> 21                         <NA>
#> 22 not reaching caudal skeleton
#>                                                                                                                                     Lateral process of premaxilla
#> 1                               very short, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0,0
#> 2                         very short, edentulous, lacking lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0,0
#> 3                         very short, edentulous, lacking lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0,0
#> 4                         very short, edentulous, lacking lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0,0
#> 5                         very short, edentulous, lacking lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0,0
#> 6                         very short, edentulous, lacking lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0,0
#> 7                         very short, edentulous, lacking lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0,0
#> 8                               very short, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0,0
#> 9                          moderately long, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,1,0
#> 10                              very short, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0,0
#> 11                              very short, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0,0
#> 12                              very short, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0,0
#> 13                              very short, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0,0
#> 14                              very short, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0,0
#> 15                              very short, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,0,0
#> 16                                 long, toothed, lacking lateral shelf.  In the original matrix this character was coded in additive binary format:  1,1,1,0,0,0
#> 17 moderate length, edentulous or partly toothed, lacking lateral shelf.  In the original matrix this character was coded in additive binary format:  1,1,0,0,0,0
#> 18 moderate length, edentulous or partly toothed, lacking lateral shelf.  In the original matrix this character was coded in additive binary format:  1,1,0,0,0,0
#> 19                                                           no process.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0,0
#> 20                               very long, toothed, with lateral shelf.  In the original matrix this character was coded in additive binary format:  1,0,0,1,1,1
#> 21                                                           no process.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0,0
#> 22                                                           no process.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0,0
#>    Length of cleithral symphysis Length of posterior cleithral process
#> 1                          short                          intermediate
#> 2                   intermediate                          intermediate
#> 3                           long                                 short
#> 4                   intermediate                                 short
#> 5             exceptionally long                                 short
#> 6                   intermediate                                 short
#> 7                          short                          intermediate
#> 8                          short                                  long
#> 9                          short                          intermediate
#> 10                         short                                  long
#> 11                         short                                  long
#> 12                         short                          intermediate
#> 13                         short                                  long
#> 14                         short                                  long
#> 15                         short                                  long
#> 16                         short                    scarcely developed
#> 17                         short                    scarcely developed
#> 18                         short                    scarcely developed
#> 19                         short                    scarcely developed
#> 20                         short                    scarcely developed
#> 21                          <NA>                    scarcely developed
#> 22                         short                    scarcely developed
#>    Mandible length Mandibular sensory canal pores, species modes
#> 1             long                                           six
#> 2             long                                           six
#> 3     intermediate                                           six
#> 4     intermediate                                           six
#> 5     intermediate                                           six
#> 6             long                                           six
#> 7             long                                           six
#> 8            short                                           six
#> 9            short                                           six
#> 10           short                                           six
#> 11           short                                           six
#> 12    intermediate                                           six
#> 13           short                                           six
#> 14           short                                           six
#> 15           short                                           six
#> 16            long                                         seven
#> 17            long                                         seven
#> 18            long                                         seven
#> 19            <NA>                                           six
#> 20    intermediate                                         eight
#> 21            <NA>                                         eight
#> 22           short                                         seven
#>    Mandibular symphyseal ventral process
#> 1                                 absent
#> 2                                 absent
#> 3                                 absent
#> 4                                 absent
#> 5                                 absent
#> 6                                 absent
#> 7                                 absent
#> 8                                 absent
#> 9                                 absent
#> 10                                absent
#> 11                                absent
#> 12                                absent
#> 13                                absent
#> 14                                absent
#> 15                                absent
#> 16                                absent
#> 17                                absent
#> 18                                absent
#> 19                                absent
#> 20                               present
#> 21                                absent
#> 22                                absent
#>                                Mesethmoid cornua Mesial process of premaxilla
#> 1        deeply forked and with mesial processes                       absent
#> 2        deeply forked and with mesial processes             variably present
#> 3     deeply forked and without mesial processes             variably present
#> 4        deeply forked and with mesial processes               always present
#> 5        deeply forked and with mesial processes             variably present
#> 6        deeply forked and with mesial processes             variably present
#> 7        deeply forked and with mesial processes             variably present
#> 8        deeply forked and with mesial processes                       absent
#> 9        deeply forked and with mesial processes                       absent
#> 10       deeply forked and with mesial processes                       absent
#> 11       deeply forked and with mesial processes                       absent
#> 12       deeply forked and with mesial processes                       absent
#> 13       deeply forked and with mesial processes                       absent
#> 14       deeply forked and with mesial processes                       absent
#> 15       deeply forked and with mesial processes                       absent
#> 16       deeply forked and with mesial processes                       absent
#> 17       deeply forked and with mesial processes                       absent
#> 18       deeply forked and with mesial processes                       absent
#> 19       deeply forked and with mesial processes                       absent
#> 20 shallowly forked and without mesial processes                       absent
#> 21 shallowly forked and without mesial processes                       absent
#> 22 shallowly forked and without mesial processes                       absent
#>                                                                                                                                                                Metapterygoid form
#> 1     ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 2     ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 3             ventral edge nearly straight, anterior process obsolete, dorsal edge straight.  In the original matrix this character was coded in additive binary format:  1,0,1,1
#> 4                ventral edge nearly straight, anterior process small, dorsal edge straight.  In the original matrix this character was coded in additive binary format:  1,0,1,0
#> 5             ventral edge nearly straight, anterior process obsolete, dorsal edge straight.  In the original matrix this character was coded in additive binary format:  1,0,1,1
#> 6     ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 7     ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 8     ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 9              ventral edge strongly curved, anterior process prominent, dorsal edge convex.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 10    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 11             ventral edge strongly curved, anterior process prominent, dorsal edge convex.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 12    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 13    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 14    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 15    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 16    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 17    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 18    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 19    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#> 20 ventral edge scarcely curved and short, anterior process prominent, dorsal edge straight.  In the original matrix this character was coded in additive binary format:  1,1,0,0
#> 21                                                                                                                                                                           <NA>
#> 22    ventral edge strongly curved, anterior process prominent, dorsal edge scarcely convex.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#>                                                   Middle Nuchal plate of first dorsal-fin pterygiophore
#> 1          well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 2          well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 3          well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 4  slightly reduced with slender posterior limbs, foramina for spine tendons usually visible from above
#> 5          well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 6          well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 7          well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 8          well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 9  slightly reduced with slender posterior limbs, foramina for spine tendons usually visible from above
#> 10         well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 11         well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 12 slightly reduced with slender posterior limbs, foramina for spine tendons usually visible from above
#> 13 slightly reduced with slender posterior limbs, foramina for spine tendons usually visible from above
#> 14 slightly reduced with slender posterior limbs, foramina for spine tendons usually visible from above
#> 15         well developed with stout posterior limbs, foramina for spine tendons not visible from above
#> 16         reduced with slender posterior limbs, foramina for spine tendons never covered by bone above
#> 17         reduced with slender posterior limbs, foramina for spine tendons never covered by bone above
#> 18 slightly reduced with slender posterior limbs, foramina for spine tendons usually visible from above
#> 19                                greatly reduced with no posterior limbs or foramina for spine tendons
#> 20 slightly reduced with slender posterior limbs, foramina for spine tendons usually visible from above
#> 21 slightly reduced with slender posterior limbs, foramina for spine tendons usually visible from above
#> 22         well developed with stout posterior limbs, foramina for spine tendons not visible from above
#>                                                                                                               Muscle crests on margin of frontal
#> 1                         adductor mandibulae crest anterior to level of epiphyseal bar, subtended by a trough for levator arcus palatini muscle
#> 2  adductor mandibulae crest anterior to level of epiphyseal bar, trough for levator arcus palatini muscle reaches anteriorly to lateral ethmoid
#> 3                         adductor mandibulae crest anterior to level of epiphyseal bar, subtended by a trough for levator arcus palatini muscle
#> 4  adductor mandibulae crest anterior to level of epiphyseal bar, trough for levator arcus palatini muscle reaches anteriorly to lateral ethmoid
#> 5                         adductor mandibulae crest anterior to level of epiphyseal bar, subtended by a trough for levator arcus palatini muscle
#> 6                         adductor mandibulae crest anterior to level of epiphyseal bar, subtended by a trough for levator arcus palatini muscle
#> 7                         adductor mandibulae crest anterior to level of epiphyseal bar, subtended by a trough for levator arcus palatini muscle
#> 8                     adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 9                     adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 10                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 11                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 12                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 13                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 14                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 15                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 16                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 17                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 18                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 19                    adductor mandibulae crest anterior to level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 20                             adductor mandibulae crest at level of epiphyseal bar, not subtended by a trough for levator arcus palatini muscle
#> 21                                                                                                                                          <NA>
#> 22                                                                                                                                          <NA>
#>        Nasal shape Neural complex = supraneural 3
#> 1    wide, tubular                         absent
#> 2    wide, tubular                         absent
#> 3  wide, flattened                         absent
#> 4  wide, flattened                         absent
#> 5  wide, flattened                         absent
#> 6    wide, tubular                         absent
#> 7    wide, tubular                         absent
#> 8  narrow, tubular                         absent
#> 9  narrow, tubular                         absent
#> 10 narrow, tubular                         absent
#> 11 narrow, tubular                          small
#> 12 narrow, tubular                         absent
#> 13 narrow, tubular                         absent
#> 14 narrow, tubular                         absent
#> 15 narrow, tubular                         absent
#> 16   wide, tubular                         absent
#> 17   wide, tubular                         absent
#> 18   wide, tubular                         absent
#> 19   wide, tubular                         absent
#> 20 wide, flattened                          large
#> 21 wide, flattened                           <NA>
#> 22 narrow, tubular                         absent
#>    Neurocranial width at epiphyseal bar
#> 1                          intermediate
#> 2                                 broad
#> 3                          intermediate
#> 4                                narrow
#> 5                          intermediate
#> 6                          intermediate
#> 7                          intermediate
#> 8                          intermediate
#> 9                          intermediate
#> 10                         intermediate
#> 11                         intermediate
#> 12                               narrow
#> 13                         intermediate
#> 14                         intermediate
#> 15                         intermediate
#> 16                               narrow
#> 17                               narrow
#> 18                               narrow
#> 19                               narrow
#> 20                               narrow
#> 21                               narrow
#> 22                               narrow
#>                                                    Opercle shape
#> 1       narrow, dorsal and anterior edges meet at ca. 100° angle
#> 2  moderately broad, dorsal and anterior edges meet at 90° angle
#> 3  moderately broad, dorsal and anterior edges meet at 90° angle
#> 4  moderately broad, dorsal and anterior edges meet at 90° angle
#> 5  moderately broad, dorsal and anterior edges meet at 90° angle
#> 6       narrow, dorsal and anterior edges meet at ca. 100° angle
#> 7  moderately broad, dorsal and anterior edges meet at 90° angle
#> 8  moderately broad, dorsal and anterior edges meet at 90° angle
#> 9  moderately broad, dorsal and anterior edges meet at 90° angle
#> 10 moderately broad, dorsal and anterior edges meet at 90° angle
#> 11 moderately broad, dorsal and anterior edges meet at 90° angle
#> 12 moderately broad, dorsal and anterior edges meet at 90° angle
#> 13 moderately broad, dorsal and anterior edges meet at 90° angle
#> 14 moderately broad, dorsal and anterior edges meet at 90° angle
#> 15 moderately broad, dorsal and anterior edges meet at 90° angle
#> 16 very narrow, dorsal and anterior edges meet at ca. 100° angle
#> 17 very narrow, dorsal and anterior edges meet at ca. 100° angle
#> 18 very narrow, dorsal and anterior edges meet at ca. 100° angle
#> 19 moderately broad, dorsal and anterior edges meet at 90° angle
#> 20                             broad, dorsal edge deeply concave
#> 21                                                          <NA>
#> 22 moderately broad, dorsal and anterior edges meet at 90° angle
#>    Opercular facet position on posterior edge of hyomandibular
#> 1                                               below midpoint
#> 2                                          at or near midpoint
#> 3                                          at or near midpoint
#> 4                                          at or near midpoint
#> 5                                          at or near midpoint
#> 6                                               below midpoint
#> 7                                          at or near midpoint
#> 8                                          at or near midpoint
#> 9                                          at or near midpoint
#> 10                                         at or near midpoint
#> 11                                         at or near midpoint
#> 12                                         at or near midpoint
#> 13                                         at or near midpoint
#> 14                                         at or near midpoint
#> 15                                         at or near midpoint
#> 16                                         at or near midpoint
#> 17                                         at or near midpoint
#> 18                                         at or near midpoint
#> 19                                         at or near midpoint
#> 20                                              above midpoint
#> 21                                                        <NA>
#> 22                                              above midpoint
#>           Optic foramen                           Orbital foramen
#> 1            very small on or near lateral ethmoid-frontal suture
#> 2            very small on or near lateral ethmoid-frontal suture
#> 3            very small on or near lateral ethmoid-frontal suture
#> 4            very small on or near lateral ethmoid-frontal suture
#> 5            very small on or near lateral ethmoid-frontal suture
#> 6            very small on or near lateral ethmoid-frontal suture
#> 7            very small on or near lateral ethmoid-frontal suture
#> 8            very large on or near lateral ethmoid-frontal suture
#> 9            very large on or near lateral ethmoid-frontal suture
#> 10           very large on or near lateral ethmoid-frontal suture
#> 11           very large on or near lateral ethmoid-frontal suture
#> 12           very large on or near lateral ethmoid-frontal suture
#> 13           very large on or near lateral ethmoid-frontal suture
#> 14           very large on or near lateral ethmoid-frontal suture
#> 15           very large on or near lateral ethmoid-frontal suture
#> 16           very small               in the lateral ethmoid wing
#> 17           very small               in the lateral ethmoid wing
#> 18           very small               in the lateral ethmoid wing
#> 19           very small                                      <NA>
#> 20 small and subdivided on or near lateral ethmoid-frontal suture
#> 21                 <NA>                                      <NA>
#> 22                 <NA>                                      <NA>
#>                           Orbital rim Orbitosphenoid shelves
#> 1                                free                  broad
#> 2                                free                  broad
#> 3                                free                  broad
#> 4                                free                  broad
#> 5                                free                  broad
#> 6                                free                  broad
#> 7                                free                  broad
#> 8                                free        small or absent
#> 9                                free        small or absent
#> 10                               free        small or absent
#> 11                               free           intermediate
#> 12                               free        small or absent
#> 13                               free        small or absent
#> 14                               free        small or absent
#> 15                               free        small or absent
#> 16 united to cornea, eye subcutaneous        small or absent
#> 17 united to cornea, eye subcutaneous        small or absent
#> 18 united to cornea, eye subcutaneous        small or absent
#> 19                               <NA>        small or absent
#> 20                               free        small or absent
#> 21                               <NA>                   <NA>
#> 22                               <NA>           intermediate
#>          Ornamentation pattern on posterior cleithral process Palatine length
#> 1                   ridges lacking, fine tubercles throughout    intermediate
#> 2  ridges lacking, well developed coarse tubercles throughout    intermediate
#> 3            subparallel ridges, occasional tubercles on base            long
#> 4              few ridges, tubercles on base and ventral edge            long
#> 5              few ridges, tubercles on base and ventral edge            long
#> 6                   ridges lacking, fine tubercles throughout    intermediate
#> 7                   ridges lacking, fine tubercles throughout    intermediate
#> 8              few ridges, tubercles on base and ventral edge           short
#> 9                            subparallel ridges, no tubercles           short
#> 10             few ridges, tubercles on base and ventral edge           short
#> 11                           subparallel ridges, no tubercles           short
#> 12                  ridges lacking, fine tubercles throughout           short
#> 13             few ridges, tubercles on base and ventral edge           short
#> 14             few ridges, tubercles on base and ventral edge           short
#> 15             few ridges, tubercles on base and ventral edge           short
#> 16                           subparallel ridges, no tubercles           short
#> 17                           subparallel ridges, no tubercles           short
#> 18                           subparallel ridges, no tubercles           short
#> 19                           subparallel ridges, no tubercles            <NA>
#> 20                           subparallel ridges, no tubercles    intermediate
#> 21                           subparallel ridges, no tubercles            <NA>
#> 22                           subparallel ridges, no tubercles            <NA>
#>                                                          Parasphenoid stem
#> 1                     tapered posteriorly and narrower than orbitosphenoid
#> 2                     tapered posteriorly and narrower than orbitosphenoid
#> 3                     tapered posteriorly and narrower than orbitosphenoid
#> 4                     tapered posteriorly and narrower than orbitosphenoid
#> 5                     tapered posteriorly and narrower than orbitosphenoid
#> 6                     tapered posteriorly and narrower than orbitosphenoid
#> 7                     tapered posteriorly and narrower than orbitosphenoid
#> 8                     tapered posteriorly and narrower than orbitosphenoid
#> 9                     tapered posteriorly and narrower than orbitosphenoid
#> 10                    tapered posteriorly and narrower than orbitosphenoid
#> 11                    tapered posteriorly and narrower than orbitosphenoid
#> 12                    tapered posteriorly and narrower than orbitosphenoid
#> 13                    tapered posteriorly and narrower than orbitosphenoid
#> 14                    tapered posteriorly and narrower than orbitosphenoid
#> 15                    tapered posteriorly and narrower than orbitosphenoid
#> 16 scarcely tapered posteriorly and about equal in width to orbitosphenoid
#> 17 scarcely tapered posteriorly and about equal in width to orbitosphenoid
#> 18 scarcely tapered posteriorly and about equal in width to orbitosphenoid
#> 19 scarcely tapered posteriorly and about equal in width to orbitosphenoid
#> 20       scarcely tapered posteriorly and much broader than orbitosphenoid
#> 21                                                                    <NA>
#> 22                    tapered posteriorly and narrower than orbitosphenoid
#>                                              Pectoral spine late ontogeny
#> 1                 slight reduction in dentation size and sharpness of tip
#> 2                 slight reduction in dentation size and sharpness of tip
#> 3                 slight reduction in dentation size and sharpness of tip
#> 4                 slight reduction in dentation size and sharpness of tip
#> 5                 slight reduction in dentation size and sharpness of tip
#> 6                 slight reduction in dentation size and sharpness of tip
#> 7                 slight reduction in dentation size and sharpness of tip
#> 8  marked reduction in dentation size plus distal flattening and blunting
#> 9  marked reduction in dentation size plus distal flattening and blunting
#> 10 marked reduction in dentation size plus distal flattening and blunting
#> 11 marked reduction in dentation size plus distal flattening and blunting
#> 12 marked reduction in dentation size plus distal flattening and blunting
#> 13 marked reduction in dentation size plus distal flattening and blunting
#> 14 marked reduction in dentation size plus distal flattening and blunting
#> 15 marked reduction in dentation size plus distal flattening and blunting
#> 16                slight reduction in dentation size and sharpness of tip
#> 17                slight reduction in dentation size and sharpness of tip
#> 18                slight reduction in dentation size and sharpness of tip
#> 19                slight reduction in dentation size and sharpness of tip
#> 20                slight reduction in dentation size and sharpness of tip
#> 21                slight reduction in dentation size and sharpness of tip
#> 22                slight reduction in dentation size and sharpness of tip
#>    Pectoral spine tip        Pectoral-fin radials
#> 1               sharp                   not fused
#> 2               sharp                   not fused
#> 3               sharp                   not fused
#> 4               sharp                   not fused
#> 5               sharp                   not fused
#> 6               sharp                   not fused
#> 7               sharp                   not fused
#> 8               sharp                   not fused
#> 9               sharp                   not fused
#> 10              sharp                   not fused
#> 11              sharp                   not fused
#> 12              sharp                   not fused
#> 13              sharp                   not fused
#> 14              sharp                   not fused
#> 15              sharp                   not fused
#> 16              sharp                   not fused
#> 17              sharp                 fully fused
#> 18              sharp partially or variably fused
#> 19 blunt or truncated partially or variably fused
#> 20 blunt or truncated                   not fused
#> 21              sharp                        <NA>
#> 22              sharp                   not fused
#>    Pectoral-fin soft rays, species modal count     Pelvic splint
#> 1                                           10           present
#> 2                                            9           present
#> 3                                            9           present
#> 4                                            8           present
#> 5                                            9           present
#> 6                                           10           present
#> 7                                            9           present
#> 8                                            9           present
#> 9                                           11           present
#> 10                                           9           present
#> 11                                          10           present
#> 12                                           9           present
#> 13                                           9           present
#> 14                                          10           present
#> 15                                           9           present
#> 16                                          10 reduced or absent
#> 17                                           9 reduced or absent
#> 18                                           9 reduced or absent
#> 19                                           9 reduced or absent
#> 20                                          11           present
#> 21                                          10              <NA>
#> 22                                           9 reduced or absent
#>    Pelvic-fin rays, species modal counts Posterior cranial fontanelle (adults)
#> 1                                      8                                closed
#> 2                                      8                          broadly open
#> 3                                      8                         narrowly open
#> 4                                      8                                closed
#> 5                                      8                         narrowly open
#> 6                                      8                                closed
#> 7                                      8                         narrowly open
#> 8                                      8                         narrowly open
#> 9                                      8                         narrowly open
#> 10                                     8                         narrowly open
#> 11                                     8                         narrowly open
#> 12                                     8                         narrowly open
#> 13                                     8                         narrowly open
#> 14                                     8                         narrowly open
#> 15                                     8                         narrowly open
#> 16                                     9                                closed
#> 17                                     9                         narrowly open
#> 18                                     9                         narrowly open
#> 19                                     8                          broadly open
#> 20                          bimodal 9-10                                closed
#> 21                          bimodal 9-10                                  <NA>
#> 22                                     8                         narrowly open
#>                                                       Posterior dentation bases
#> 1                    most dentations arise only from dorsal half of spine shaft
#> 2           many proximal dentations arise only from dorsal half of spine shaft
#> 3            few proximal dentations arise only from dorsal half of spine shaft
#> 4           many proximal dentations arise only from dorsal half of spine shaft
#> 5                    most dentations arise only from dorsal half of spine shaft
#> 6                    most dentations arise only from dorsal half of spine shaft
#> 7                    most dentations arise only from dorsal half of spine shaft
#> 8                    most dentations arise only from dorsal half of spine shaft
#> 9            few proximal dentations arise only from dorsal half of spine shaft
#> 10           few proximal dentations arise only from dorsal half of spine shaft
#> 11          many proximal dentations arise only from dorsal half of spine shaft
#> 12                   most dentations arise only from dorsal half of spine shaft
#> 13                   most dentations arise only from dorsal half of spine shaft
#> 14                   most dentations arise only from dorsal half of spine shaft
#> 15                   most dentations arise only from dorsal half of spine shaft
#> 16 dentation halves arise equally from dorsal and ventral halves of spine shaft
#> 17                   most dentations arise only from dorsal half of spine shaft
#> 18                                                                         <NA>
#> 19 dentation halves arise equally from dorsal and ventral halves of spine shaft
#> 20                                                                         <NA>
#> 21          many proximal dentations arise only from dorsal half of spine shaft
#> 22                   most dentations arise only from dorsal half of spine shaft
#>                                                                Posterior dentation shape
#> 1                                                                                   <NA>
#> 2  dentation halves often misaligned, tips multifid, regularly spaced distally, retrorse
#> 3  dentation halves often misaligned, tips multifid, regularly spaced distally, retrorse
#> 4                                      dentation halves misaligned, tips multifid, erect
#> 5  dentation halves often misaligned, tips multifid, regularly spaced distally, retrorse
#> 6                                                                                   <NA>
#> 7  dentation halves often misaligned, tips multifid, regularly spaced distally, retrorse
#> 8                                   dentation halves aligned, regularly spaced, retrorse
#> 9                                   dentation halves aligned, regularly spaced, retrorse
#> 10                                  dentation halves aligned, regularly spaced, retrorse
#> 11                                  dentation halves aligned, regularly spaced, retrorse
#> 12                                  dentation halves aligned, regularly spaced, retrorse
#> 13                                  dentation halves aligned, regularly spaced, retrorse
#> 14                                  dentation halves aligned, regularly spaced, retrorse
#> 15                                  dentation halves aligned, regularly spaced, retrorse
#> 16                                  dentation halves aligned, regularly spaced, retrorse
#> 17                                                                                  <NA>
#> 18                                  dentation halves aligned, regularly spaced, retrorse
#> 19                                  dentation halves aligned, regularly spaced, retrorse
#> 20                                     dentation halves misaligned, tips multifid, erect
#> 21                                                                                  <NA>
#> 22                                                                                  <NA>
#>    Posterior end of adductor arcus palatini scar on parasphenoid
#> 1                                                turned dorsally
#> 2                                                turned dorsally
#> 3                                                turned dorsally
#> 4                                                turned dorsally
#> 5                                                turned dorsally
#> 6                                                turned dorsally
#> 7                                                turned dorsally
#> 8                                                turned dorsally
#> 9                                                turned dorsally
#> 10                                               turned dorsally
#> 11                                               turned dorsally
#> 12                                               turned dorsally
#> 13                                               turned dorsally
#> 14                                               turned dorsally
#> 15                                               turned dorsally
#> 16                    horizontal, in line with parasphenoid stem
#> 17                    horizontal, in line with parasphenoid stem
#> 18                    horizontal, in line with parasphenoid stem
#> 19                    horizontal, in line with parasphenoid stem
#> 20                                               turned dorsally
#> 21                                                          <NA>
#> 22                                                          <NA>
#>                      Posterior flap of adipose fin
#> 1                    free from back and caudal fin
#> 2                    free from back and caudal fin
#> 3                    free from back and caudal fin
#> 4                    free from back and caudal fin
#> 5                    free from back and caudal fin
#> 6                    free from back and caudal fin
#> 7                    free from back and caudal fin
#> 8                    free from back and caudal fin
#> 9                    free from back and caudal fin
#> 10                   free from back and caudal fin
#> 11                   free from back and caudal fin
#> 12                   free from back and caudal fin
#> 13                   free from back and caudal fin
#> 14                   free from back and caudal fin
#> 15                   free from back and caudal fin
#> 16 adnate to back and broadly joined to caudal fin
#> 17 adnate to back and broadly joined to caudal fin
#> 18  adnate to back and partly joined to caudal fin
#> 19 adnate to back and broadly joined to caudal fin
#> 20                   free from back and caudal fin
#> 21  adnate to back and partly joined to caudal fin
#> 22  adnate to back and partly joined to caudal fin
#>    Posterior process of articular
#> 1                           small
#> 2                           small
#> 3                           small
#> 4                           small
#> 5                           small
#> 6                           small
#> 7                           small
#> 8                           small
#> 9                           small
#> 10                          small
#> 11                          small
#> 12                          small
#> 13                          small
#> 14                          small
#> 15                          small
#> 16                          small
#> 17                          small
#> 18                          small
#> 19                          small
#> 20                       enlarged
#> 21                       enlarged
#> 22                          small
#>           Posterolateral process of basipterygium
#> 1  prominent, not joined to anterolateral process
#> 2  prominent, not joined to anterolateral process
#> 3  prominent, not joined to anterolateral process
#> 4  prominent, not joined to anterolateral process
#> 5  prominent, not joined to anterolateral process
#> 6  prominent, not joined to anterolateral process
#> 7  prominent, not joined to anterolateral process
#> 8                                         reduced
#> 9                                         reduced
#> 10                                        reduced
#> 11                                        reduced
#> 12                                        reduced
#> 13                                        reduced
#> 14                                        reduced
#> 15                                        reduced
#> 16 prominent, not joined to anterolateral process
#> 17 prominent, not joined to anterolateral process
#> 18 prominent, not joined to anterolateral process
#> 19     prominent, joined to anterolateral process
#> 20     prominent, joined to anterolateral process
#> 21                                           <NA>
#> 22                                           <NA>
#>    Precaudal vertebrae, species mean number Premaxilla width
#> 1                                 17.2-18.5            broad
#> 2                                 17.2-18.5            broad
#> 3                                     <17.1     intermediate
#> 4                                     <17.1     intermediate
#> 5                                     <17.1     intermediate
#> 6                                 17.2-18.5            broad
#> 7                                 17.2-18.5            broad
#> 8                                 17.2-18.5           narrow
#> 9                                     >20.5           narrow
#> 10                                17.2-18.5           narrow
#> 11                                19.6-20.5           narrow
#> 12                                17.2-18.5           narrow
#> 13                                18.6-19.5           narrow
#> 14                                18.6-19.5           narrow
#> 15                                19.6-20.5           narrow
#> 16                                17.2-18.5           narrow
#> 17                                    <17.1           narrow
#> 18                                    <17.1           narrow
#> 19                                    <17.1           narrow
#> 20                                    >20.5     intermediate
#> 21                                17.2-18.5             <NA>
#> 22                                    <17.1             <NA>
#>                                                                                       Premaxillary teeth-size and number
#> 1  intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 2  intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 3            some large teeth, few.  In the original matrix this character was coded in additive binary format:  0,0,1,0
#> 4  intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 5          mostly large teeth, few.  In the original matrix this character was coded in additive binary format:  0,0,1,1
#> 6  intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 7  intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 8  intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 9  intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 10 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 11 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 12 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 13 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 14 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 15 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 16 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 17 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 18 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 19 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 20                 small, numerous.  In the original matrix this character was coded in additive binary format:  0,1,0,0
#> 21 intermediate in size and number.  In the original matrix this character was coded in additive binary format:  0,0,0,0
#> 22        very weak, few to absent.  In the original matrix this character was coded in additive binary format:  1,0,0,0
#>    Process on hyomandibular for adductor hyomandibularis muscle
#> 1                                                  low, rounded
#> 2                                                  low, rounded
#> 3                                                 high, angular
#> 4                                                  low, rounded
#> 5                                            very high, angular
#> 6                                                  low, rounded
#> 7                                                  low, rounded
#> 8                                                  low, rounded
#> 9                                                  low, rounded
#> 10                                                 low, rounded
#> 11                                                 low, rounded
#> 12                                                 low, rounded
#> 13                                                 low, rounded
#> 14                                                 low, rounded
#> 15                                                 low, rounded
#> 16                                                 low, rounded
#> 17                                                 low, rounded
#> 18                                                 low, rounded
#> 19                                                       absent
#> 20                                                 low, rounded
#> 21                                                         <NA>
#> 22                                                 low, rounded
#>    Prootic-basioccipital joint Prootic-exoccipital joint
#> 1           mostly synchondral               few sutures
#> 2           mostly synchondral               few sutures
#> 3           mostly synchondral               few sutures
#> 4           mostly synchondral               few sutures
#> 5           mostly synchondral               few sutures
#> 6           mostly synchondral               few sutures
#> 7           mostly synchondral               few sutures
#> 8               mostly sutural              many sutures
#> 9               mostly sutural              many sutures
#> 10              mostly sutural              many sutures
#> 11              mostly sutural              many sutures
#> 12              mostly sutural              many sutures
#> 13              mostly sutural              many sutures
#> 14              mostly sutural              many sutures
#> 15              mostly sutural              many sutures
#> 16          mostly synchondral               synchondral
#> 17          mostly synchondral               synchondral
#> 18          mostly synchondral               synchondral
#> 19          mostly synchondral               synchondral
#> 20          mostly synchondral               few sutures
#> 21                        <NA>                      <NA>
#> 22          mostly synchondral               synchondral
#>    Pterosphenoid-prootic joint Pterotic surface Pterotic wing shape
#> 1              short to absent           smooth             angular
#> 2              short to absent           smooth             angular
#> 3              short to absent        deep pits             angular
#> 4              short to absent few shallow pits             angular
#> 5              short to absent        deep pits             angular
#> 6              short to absent           smooth             angular
#> 7              short to absent           smooth             angular
#> 8              short to absent           smooth             angular
#> 9              short to absent           smooth             angular
#> 10             short to absent           smooth             angular
#> 11             short to absent           smooth             angular
#> 12             short to absent           smooth             angular
#> 13             short to absent           smooth             angular
#> 14             short to absent           smooth             angular
#> 15             short to absent           smooth             angular
#> 16             short to absent           smooth             rounded
#> 17             short to absent           smooth             rounded
#> 18             short to absent           smooth             rounded
#> 19             short to absent           smooth             rounded
#> 20             broadly sutured           smooth             angular
#> 21                        <NA>             <NA>                <NA>
#> 22             short to absent           smooth             angular
#>    Quadrate-metapterygoid joint composition
#> 1                            mostly sutural
#> 2                            mostly sutural
#> 3                            mostly sutural
#> 4                            mostly sutural
#> 5                            mostly sutural
#> 6                            mostly sutural
#> 7                            mostly sutural
#> 8                        mostly synchondral
#> 9                        mostly synchondral
#> 10                       mostly synchondral
#> 11                       mostly synchondral
#> 12                       mostly synchondral
#> 13                       mostly synchondral
#> 14                       mostly synchondral
#> 15                       mostly synchondral
#> 16                           mostly sutural
#> 17                           mostly sutural
#> 18                           mostly sutural
#> 19                       mostly synchondral
#> 20                           mostly sutural
#> 21                                     <NA>
#> 22                       mostly synchondral
#>                    Quadrate-metapterygoid joint length
#> 1          about equal to quadrate-hyomandibular joint
#> 2          about equal to quadrate-hyomandibular joint
#> 3          about equal to quadrate-hyomandibular joint
#> 4          about equal to quadrate-hyomandibular joint
#> 5          about equal to quadrate-hyomandibular joint
#> 6          about equal to quadrate-hyomandibular joint
#> 7          about equal to quadrate-hyomandibular joint
#> 8          about equal to quadrate-hyomandibular joint
#> 9          about equal to quadrate-hyomandibular joint
#> 10         about equal to quadrate-hyomandibular joint
#> 11         about equal to quadrate-hyomandibular joint
#> 12         about equal to quadrate-hyomandibular joint
#> 13         about equal to quadrate-hyomandibular joint
#> 14         about equal to quadrate-hyomandibular joint
#> 15         about equal to quadrate-hyomandibular joint
#> 16         about equal to quadrate-hyomandibular joint
#> 17         about equal to quadrate-hyomandibular joint
#> 18         about equal to quadrate-hyomandibular joint
#> 19         about equal to quadrate-hyomandibular joint
#> 20 about twice as long as quadrate-hyomandibular joint
#> 21                                                <NA>
#> 22         about equal to quadrate-hyomandibular joint
#>                                                                                                     Sagittal crests on skull roof
#> 1                                                                       narrow, sharp or rounded crest without sculptured surface
#> 2  broad with sculptured surface restricted to supraoccipital process base, and rounded margins near fronto-supraocctpltal suture
#> 3  broad with sculptured surface restricted to supraoccipital process base, and rounded margins near fronto-supraocctpltal suture
#> 4                                                                       narrow, sharp or rounded crest without sculptured surface
#> 5  broad with sculptured surface restricted to supraoccipital process base, and rounded margins near fronto-supraocctpltal suture
#> 6                                                                       narrow, sharp or rounded crest without sculptured surface
#> 7  broad with sculptured surface restricted to supraoccipital process base, and rounded margins near fronto-supraocctpltal suture
#> 8               broad with sculptured surface restricted to supraoccipital, and rounded margins near fronto-supraoccipital suture
#> 9                                                                              broad with sculptured surface, and angular margins
#> 10              broad with sculptured surface restricted to supraoccipital, and rounded margins near fronto-supraoccipital suture
#> 11                                                                             broad with sculptured surface, and angular margins
#> 12 broad with sculptured surface restricted to supraoccipital process base, and rounded margins near fronto-supraocctpltal suture
#> 13              broad with sculptured surface restricted to supraoccipital, and rounded margins near fronto-supraoccipital suture
#> 14              broad with sculptured surface restricted to supraoccipital, and rounded margins near fronto-supraoccipital suture
#> 15              broad with sculptured surface restricted to supraoccipital, and rounded margins near fronto-supraoccipital suture
#> 16                                                                      narrow, sharp or rounded crest without sculptured surface
#> 17                                                                      narrow, sharp or rounded crest without sculptured surface
#> 18                                                                      narrow, sharp or rounded crest without sculptured surface
#> 19                                                                      narrow, sharp or rounded crest without sculptured surface
#> 20                                                                             broad with sculptured surface, and angular margins
#> 21                                                                                                                           <NA>
#> 22                                                                      narrow, sharp or rounded crest without sculptured surface
#>    Scar on hyomandibular for A3 bundle of jaw adductor musculature
#> 1                                                          present
#> 2                                                          present
#> 3                                                          present
#> 4                                                          present
#> 5                                                          present
#> 6                                                          present
#> 7                                                          present
#> 8                                                          present
#> 9                                                           absent
#> 10                                                         present
#> 11                                                          absent
#> 12                                                         present
#> 13                                                         present
#> 14                                                         present
#> 15                                                         present
#> 16                                                         present
#> 17                                                         present
#> 18                                                         present
#> 19                                                         present
#> 20                                                         present
#> 21                                                            <NA>
#> 22                                                          absent
#>    Scar on opercle for levator operculi muscle
#> 1                                    very flat
#> 2                                        crest
#> 3                                        crest
#> 4                                        crest
#> 5                                        crest
#> 6                                    very flat
#> 7                                        crest
#> 8                         moderately flattened
#> 9                         moderately flattened
#> 10                        moderately flattened
#> 11                                       crest
#> 12                        moderately flattened
#> 13                        moderately flattened
#> 14                        moderately flattened
#> 15                        moderately flattened
#> 16                        moderately flattened
#> 17                        moderately flattened
#> 18                        moderately flattened
#> 19                                   very flat
#> 20                                   very flat
#> 21                                        <NA>
#> 22                                       crest
#>                                                                                                                                      Sculpturing pattern of supraoccipital crests
#> 1                       moderately coarse ridges, pits, if present, small and shallow.  In the original matrix this character was coded in additive binary format:  0,1,0,0,0,0,0
#> 2  coarse, occasionally reticulating ridges, separated by both grooves and small pits.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0,0,0
#> 3                                            coarse ridges and usually many deep pits.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0,0,0
#> 4                       moderately coarse ridges, pits, if present, small and shallow.  In the original matrix this character was coded in additive binary format:  0,1,0,0,0,0,0
#> 5                                            coarse ridges and usually many deep pits.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0,0,0
#> 6                       moderately coarse ridges, pits, if present, small and shallow.  In the original matrix this character was coded in additive binary format:  0,1,0,0,0,0,0
#> 7  coarse, occasionally reticulating ridges, separated by both grooves and small pits.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0,0,0
#> 8                                        very coarse ridges separated by deep grooves.  In the original matrix this character was coded in additive binary format:  0,0,0,1,1,0,0
#> 9                                                    fine ridges and grooves, no pits.  In the original matrix this character was coded in additive binary format:  0,0,0,1,0,0,1
#> 10          as preceding state in young but ornamentation becoming obsolete in adults.  In the original matrix this character was coded in additive binary format:  0,0,0,1,1,1,0
#> 11                                                   fine ridges and grooves, no pits.  In the original matrix this character was coded in additive binary format:  0,0,0,1,0,0,1
#> 12          as preceding state in young but ornamentation becoming obsolete in adults.  In the original matrix this character was coded in additive binary format:  0,0,0,1,1,1,0
#> 13                                       very coarse ridges separated by deep grooves.  In the original matrix this character was coded in additive binary format:  0,0,0,1,1,0,0
#> 14                                       very coarse ridges separated by deep grooves.  In the original matrix this character was coded in additive binary format:  0,0,0,1,1,0,0
#> 15                                       very coarse ridges separated by deep grooves.  In the original matrix this character was coded in additive binary format:  0,0,0,1,1,0,0
#> 16                                        weakly developed ridges or no ornamentation.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0,0
#> 17                                        weakly developed ridges or no ornamentation.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0,0
#> 18                                        weakly developed ridges or no ornamentation.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0,0
#> 19                                        weakly developed ridges or no ornamentation.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0,0
#> 20                                                   fine ridges and grooves, no pits.  In the original matrix this character was coded in additive binary format:  0,0,0,1,0,0,1
#> 21                                                                                                                                                                           <NA>
#> 22                                        weakly developed ridges or no ornamentation.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0,0
#>    Secondary keel on coracoid below scapular foramen
#> 1                                     high, elongate
#> 2                                         low, short
#> 3                                             absent
#> 4                                         low, short
#> 5                                             absent
#> 6                                         low, short
#> 7                                         low, short
#> 8                                         low, short
#> 9                                         low, short
#> 10                                        low, short
#> 11                                        low, short
#> 12                                        low, short
#> 13                                        low, short
#> 14                                        low, short
#> 15                                        low, short
#> 16                                        low, short
#> 17                                        low, short
#> 18                                        low, short
#> 19                                        low, short
#> 20                                        low, short
#> 21                                              <NA>
#> 22                                            absent
#>                      Sphenotic process
#> 1                    small and pointed
#> 2                    small and pointed
#> 3                  moderate and convex
#> 4                  moderate and convex
#> 5                  moderate and convex
#> 6                    small and pointed
#> 7                  moderate and convex
#> 8                               absent
#> 9                               absent
#> 10                              absent
#> 11                              absent
#> 12                              absent
#> 13                              absent
#> 14                              absent
#> 15                              absent
#> 16                   small and pointed
#> 17                   small and pointed
#> 18                   small and pointed
#> 19                   small and pointed
#> 20 sphenotic process large and angular
#> 21                                <NA>
#> 22                                <NA>
#>    Spine base condyles on second dorsal-fin pterygiophore
#> 1                                        slightly concave
#> 2                                              horizontal
#> 3                                              horizontal
#> 4                                              horizontal
#> 5                                              horizontal
#> 6                                        slightly concave
#> 7                                              horizontal
#> 8                                              horizontal
#> 9                                              horizontal
#> 10                                             horizontal
#> 11                                             horizontal
#> 12                                             horizontal
#> 13                                             horizontal
#> 14                                             horizontal
#> 15                                             horizontal
#> 16                                     distinctly concave
#> 17                                     distinctly concave
#> 18                                     distinctly concave
#> 19                                                   <NA>
#> 20                                     distinctly concave
#> 21                                                   <NA>
#> 22                                             horizontal
#>    Subpterotic process of supracleithrum Superficial ophthalmic nerve foramen
#> 1             large, subtending pterotic                                small
#> 2             large, subtending pterotic                                small
#> 3             large, subtending pterotic                         intermediate
#> 4             large, subtending pterotic                         intermediate
#> 5             large, subtending pterotic                         intermediate
#> 6             large, subtending pterotic                                small
#> 7             large, subtending pterotic                                small
#> 8             large, subtending pterotic                                small
#> 9             large, subtending pterotic                                large
#> 10            large, subtending pterotic                                small
#> 11            large, subtending pterotic                                large
#> 12            large, subtending pterotic                                small
#> 13            large, subtending pterotic                                small
#> 14            large, subtending pterotic                                small
#> 15            large, subtending pterotic                                small
#> 16        small, not contacting pterotic                                large
#> 17        small, not contacting pterotic                                large
#> 18        small, not contacting pterotic                                large
#> 19        small, not contacting pterotic                                small
#> 20            large, subtending pterotic                                small
#> 21                                  <NA>                                 <NA>
#> 22        small, not contacting pterotic                                small
#>                                                                                                                                                                            Supraoccipital process and associated supraneural
#> 1                          supraoccipital process tapering, narrow , sharply pointed posteriorly, not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0
#> 2                          supraoccipital process tapering, narrow , sharply pointed posteriorly, not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0
#> 3                          supraoccipital process tapering, narrow , sharply pointed posteriorly, not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0
#> 4             supraoccipital process tapering, very narrow, sharply pointed, and very short, supraneural with reduced nuchal plate.  In the original matrix this character was coded in additive binary format:  0,0,1,1,0,0
#> 5                          supraoccipital process tapering, narrow , sharply pointed posteriorly, not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0
#> 6             supraoccipital process tapering, very narrow, sharply pointed, and very short, supraneural with reduced nuchal plate.  In the original matrix this character was coded in additive binary format:  0,0,1,1,0,0
#> 7                          supraoccipital process tapering, narrow , sharply pointed posteriorly, not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0
#> 8                                      supraoccipital process tapering, broad, bifid posteriorly, and contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0,0
#> 9                          supraoccipital process tapering, narrow , sharply pointed posteriorly, not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0
#> 10 supraoccipital process tapering, broad, rounded to shallowly notched posteriorly, close to but not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,1,0,0,0,0
#> 11          supraoccipital process nearly parallel-sided, narrowed, bifid posteriorly, and very long, contacting large supraneural.  In the original matrix this character was coded in additive binary format:  1,0,0,0,0,0
#> 12 supraoccipital process tapering, broad, rounded to shallowly notched posteriorly, close to but not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,1,0,0,0,0
#> 13 supraoccipital process tapering, broad, rounded to shallowly notched posteriorly, close to but not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,1,0,0,0,0
#> 14 supraoccipital process tapering, broad, rounded to shallowly notched posteriorly, close to but not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,1,0,0,0,0
#> 15                                     supraoccipital process tapering, broad, bifid posteriorly, and contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,0,0,0,0,0
#> 16                                                supraoccipital process tapering, very narrow, very short, and supraneural absent.  In the original matrix this character was coded in additive binary format:  0,0,1,0,1,1
#> 17                                                supraoccipital process tapering, very narrow, very short, and supraneural absent.  In the original matrix this character was coded in additive binary format:  0,0,1,0,1,1
#> 18                                                supraoccipital process tapering, very narrow, very short, and supraneural absent.  In the original matrix this character was coded in additive binary format:  0,0,1,0,1,1
#> 19                                                supraoccipital process tapering, very narrow, very short, and supraneural absent.  In the original matrix this character was coded in additive binary format:  0,0,1,0,1,1
#> 20                              supraoccipital process tapering, very narrow, blade-like posteriorly, long, and supraneural absent.  In the original matrix this character was coded in additive binary format:  0,0,1,0,1,0
#> 21                              supraoccipital process tapering, very narrow, blade-like posteriorly, long, and supraneural absent.  In the original matrix this character was coded in additive binary format:  0,0,1,0,1,0
#> 22                         supraoccipital process tapering, narrow , sharply pointed posteriorly, not contacting large supraneural.  In the original matrix this character was coded in additive binary format:  0,0,1,0,0,0
#>    Suprapreopercle                Symplectic canal
#> 1           double              in preopercle only
#> 2           double              in preopercle only
#> 3           double              in preopercle only
#> 4           double              in preopercle only
#> 5           double              in preopercle only
#> 6           double              in preopercle only
#> 7           double              in preopercle only
#> 8   modally single              in preopercle only
#> 9   modally single              in preopercle only
#> 10  modally single              in preopercle only
#> 11  modally single              in preopercle only
#> 12  modally single              in preopercle only
#> 13  modally single              in preopercle only
#> 14  modally single              in preopercle only
#> 15  modally single              in preopercle only
#> 16          double              in preopercle only
#> 17          double              in preopercle only
#> 18          double              in preopercle only
#> 19          absent              in preopercle only
#> 20          double between preopercle and quadrate
#> 21            <NA>                            <NA>
#> 22          absent              in preopercle only
#>                  Transcapular ligament
#> 1                  completely ossified
#> 2                  completely ossified
#> 3                  completely ossified
#> 4                  completely ossified
#> 5                  completely ossified
#> 6                  completely ossified
#> 7                  completely ossified
#> 8                  completely ossified
#> 9                  completely ossified
#> 10                 completely ossified
#> 11                 completely ossified
#> 12                 completely ossified
#> 13                 completely ossified
#> 14                 completely ossified
#> 15                 completely ossified
#> 16 not ossified at junction with skull
#> 17 not ossified at junction with skull
#> 18 not ossified at junction with skull
#> 19 not ossified at junction with skull
#> 20 not ossified at junction with skull
#> 21 not ossified at junction with skull
#> 22 not ossified at junction with skull
#>                                                   Transverse occipital crests
#> 1  crests tilted obliquely backward, not expanded onto supraoccipital process
#> 2  crests tilted obliquely backward, not expanded onto supraoccipital process
#> 3           crests usually vertical, not expanded onto supraoccipital process
#> 4      crests tilted obliquely backward, expanded onto supraoccipital process
#> 5           crests usually vertical, not expanded onto supraoccipital process
#> 6  crests tilted obliquely backward, not expanded onto supraoccipital process
#> 7  crests tilted obliquely backward, not expanded onto supraoccipital process
#> 8      crests tilted obliquely backward, expanded onto supraoccipital process
#> 9  crests tilted obliquely backward, not expanded onto supraoccipital process
#> 10     crests tilted obliquely backward, expanded onto supraoccipital process
#> 11 crests tilted obliquely backward, not expanded onto supraoccipital process
#> 12     crests tilted obliquely backward, expanded onto supraoccipital process
#> 13     crests tilted obliquely backward, expanded onto supraoccipital process
#> 14     crests tilted obliquely backward, expanded onto supraoccipital process
#> 15     crests tilted obliquely backward, expanded onto supraoccipital process
#> 16  crests tilted obliquely forward, not expanded onto supraoccipital process
#> 17  crests tilted obliquely forward, not expanded onto supraoccipital process
#> 18  crests tilted obliquely forward, not expanded onto supraoccipital process
#> 19  crests tilted obliquely forward, not expanded onto supraoccipital process
#> 20                                                                       <NA>
#> 21                                                                       <NA>
#> 22 crests tilted obliquely backward, not expanded onto supraoccipital process
#>                                      Upper limb of preopercle
#> 1  extends dorsal to level of adductor crest on hyomandibular
#> 2       truncated at level of adductor crest on hyomandibular
#> 3       truncated at level of adductor crest on hyomandibular
#> 4       truncated at level of adductor crest on hyomandibular
#> 5       truncated at level of adductor crest on hyomandibular
#> 6  extends dorsal to level of adductor crest on hyomandibular
#> 7       truncated at level of adductor crest on hyomandibular
#> 8  extends dorsal to level of adductor crest on hyomandibular
#> 9  extends dorsal to level of adductor crest on hyomandibular
#> 10 extends dorsal to level of adductor crest on hyomandibular
#> 11 extends dorsal to level of adductor crest on hyomandibular
#> 12 extends dorsal to level of adductor crest on hyomandibular
#> 13 extends dorsal to level of adductor crest on hyomandibular
#> 14 extends dorsal to level of adductor crest on hyomandibular
#> 15 extends dorsal to level of adductor crest on hyomandibular
#> 16      truncated at level of adductor crest on hyomandibular
#> 17      truncated at level of adductor crest on hyomandibular
#> 18      truncated at level of adductor crest on hyomandibular
#> 19      truncated at level of adductor crest on hyomandibular
#> 20      truncated at level of adductor crest on hyomandibular
#> 21                                                       <NA>
#> 22      truncated at level of adductor crest on hyomandibular
#>                                                                                                                                     Urohyal shape
#> 1        vertical and horizontal laminae subequal, very broad.  In the original matrix this character was coded in additive binary format:  1,0,0
#> 2  vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 3  vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 4  vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 5    vertical lamina longer than horizontal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,1,0
#> 6        vertical and horizontal laminae subequal, very broad.  In the original matrix this character was coded in additive binary format:  1,0,0
#> 7  vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 8  vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 9  vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 10 vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 11 vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 12 vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 13 vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 14 vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 15 vertical and horizontal laminae subequal, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,0
#> 16       vertical and horizontal laminae subequal, very broad.  In the original matrix this character was coded in additive binary format:  1,0,0
#> 17       vertical and horizontal laminae subequal, very broad.  In the original matrix this character was coded in additive binary format:  1,0,0
#> 18       vertical and horizontal laminae subequal, very broad.  In the original matrix this character was coded in additive binary format:  1,0,0
#> 19 horizontal lamina with truncated corners, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,1
#> 20 horizontal lamina with truncated corners, breadth moderate.  In the original matrix this character was coded in additive binary format:  0,0,1
#> 21                                                                                                                                           <NA>
#> 22       vertical and horizontal laminae subequal, very broad.  In the original matrix this character was coded in additive binary format:  1,0,0
#>                     Ventral keel of coracoid Ventral ridges on first centrum
#> 1  short, less than half distance to midline                       prominent
#> 2  short, less than half distance to midline                       prominent
#> 3  short, less than half distance to midline                       prominent
#> 4  short, less than half distance to midline                       prominent
#> 5  short, less than half distance to midline                       prominent
#> 6  short, less than half distance to midline                       prominent
#> 7  short, less than half distance to midline                       prominent
#> 8               long, nearly reaches midline                       prominent
#> 9    intermediate, about half way to midline                       prominent
#> 10   intermediate, about half way to midline                       prominent
#> 11              long, nearly reaches midline                       prominent
#> 12   intermediate, about half way to midline                       prominent
#> 13              long, nearly reaches midline                       prominent
#> 14   intermediate, about half way to midline                       prominent
#> 15              long, nearly reaches midline                       prominent
#> 16 short, less than half distance to midline                       prominent
#> 17 short, less than half distance to midline                       prominent
#> 18 short, less than half distance to midline                       prominent
#> 19 short, less than half distance to midline                weakly developed
#> 20 short, less than half distance to midline                weakly developed
#> 21                                      <NA>                            <NA>
#> 22 short, less than half distance to midline                weakly developed
#>    Vertical lamina between third and fourth neural spines
#> 1                            low with concave dorsal edge
#> 2                            low with concave dorsal edge
#> 3                            low with concave dorsal edge
#> 4                            low with concave dorsal edge
#> 5                            low with concave dorsal edge
#> 6                            low with concave dorsal edge
#> 7                            low with concave dorsal edge
#> 8                            low with concave dorsal edge
#> 9                            low with concave dorsal edge
#> 10                           low with concave dorsal edge
#> 11                          high with concave dorsal edge
#> 12                           low with concave dorsal edge
#> 13                           low with concave dorsal edge
#> 14                           low with concave dorsal edge
#> 15                           low with concave dorsal edge
#> 16                           absent or scarcely developed
#> 17                           absent or scarcely developed
#> 18                           low with concave dorsal edge
#> 19                           absent or scarcely developed
#> 20                         high with straight dorsal edge
#> 21                                                   <NA>
#> 22                           absent or scarcely developed
#>    Vertical wing of frontal Width of mesethmoid neck
#> 1                      deep                    broad
#> 2                      deep                    broad
#> 3                      deep                    broad
#> 4                      deep                    broad
#> 5                      deep             intermediate
#> 6                      deep                    broad
#> 7                      deep             intermediate
#> 8                      deep                   narrow
#> 9                      deep             intermediate
#> 10                     deep                   narrow
#> 11                     deep             intermediate
#> 12                     deep                   narrow
#> 13                     deep                   narrow
#> 14                     deep                   narrow
#> 15                     deep                   narrow
#> 16                  shallow             intermediate
#> 17                  shallow             intermediate
#> 18                  shallow                   narrow
#> 19                  shallow             intermediate
#> 20                  shallow                    broad
#> 21                     <NA>             intermediate
#> 22                  shallow                   narrow
#>    Width of snout across mesethmoid cornua
#> 1                               very broad
#> 2                               very broad
#> 3                                    broad
#> 4                                    broad
#> 5                                   narrow
#> 6                               very broad
#> 7                                    broad
#> 8                              very narrow
#> 9                                   narrow
#> 10                                  narrow
#> 11                                  narrow
#> 12                             very narrow
#> 13                             very narrow
#> 14                             very narrow
#> 15                             very narrow
#> 16                                  narrow
#> 17                                  narrow
#> 18                             very narrow
#> 19                                  narrow
#> 20                              very broad
#> 21                              very broad
#> 22                              very broad